Detecting Selection In Genes
  1. Detecting episodic positive selection
A tutorial using PAML
by Maria Anisimova and Jūlija Pečerska
Data
  • lysozymeSmall.phy
  • lysozymeSmall.newick
Output from CodeML v4.10.0
  • lysozymeSmall_MA.txt
  • lysozymeSmall_MA1.txt
Control files for CodeML v4.10.0
  • codeml_MA.ctl
  • codeml_MA1.ctl
Labelled tree file
  • lysozymeSmall_colobines.newick

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